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Kambhampati D. (ed.) — Protein Microarray Technology
Kambhampati D. (ed.) — Protein Microarray Technology



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Название: Protein Microarray Technology

Автор: Kambhampati D. (ed.)

Аннотация:

This book is the first of its kind in the field of protein microarrays and addresses novel strategies for constructing highly functional and biocompatible microarrays for screening proteins.
The list of authors consisting of world leading experts provide a roadmap for solving the complex challenges that are currently faced while monitoring protein-protein interactions over a wide range of microarray platforms. In doing so, they also offer a comprehensive overview of microarray surface chemistry, detection technologies, fabrication options for array development, and data analysis of numerous types of protein interactions.


Язык: en

Рубрика: Computer science/Биоинформатика/

Статус предметного указателя: Готов указатель с номерами страниц

ed2k: ed2k stats

Год издания: 2004

Количество страниц: 268

Добавлена в каталог: 18.11.2005

Операции: Положить на полку | Скопировать ссылку для форума | Скопировать ID
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Предметный указатель
Interaction, salt bridge      174
Interaction, solid-water interface      131
Isothiocyanate      29
Kolmogorov — Smirnov tests      234
Kretschmann      136
Lab-on-a-chip      25 26
Label-free detection      195 207
Label-free detection, DNA oligonucleotides      207f
Label-free detection, hybridization      207f
Label-free detection, proteins      208f
Label-free detection, single-base mismatch      207
Laboratory Information Management System      171
Laser scanner      181
Lipoic acid      144
Log-normal      223
Luminescence assay      27
Maleimide      13 29
Mannitol      18
Manual flagging      235
Mass spectrometry      18 22 27 97 183
Mass spectrometry, ESI      97
Mass spectrometry, MALDI-TOF      97
Mass transport      76
Mass transport in concentration assays      76
Mass transport in kinetics assays      76
Mass transport, diffusion coefficient      76
Mass transport, re-binding      76
Matched filtering      218
Matrix      132ff
Matrix, Dextran      133
Mean      222
Median      222
Methacrylate      24
MICA      14
Micro-capillary electrophoresis      27
Microarray plate      179
Microarray smearing      15
Microchannel      26f
Microcontact printing      16 21
Microelectrode structure      27
Microfluidic channels      110 113 127
Microfluidic device      25ff
Microfluidics      25
Microfluidics system      67 75
Microfluidics system, flow cell      67ff
Microfluidics system, hydrodynamic addressing      67
Microfluidics system, IFC      75
Microfluidics system, integrated microfluidic cartridge      67ff
Microfluidics system, laminar flow      75
Mixed monolayer      18 21
MODE      222
Monolayer      27
MutS proteins      116ff
Myoglobin      2098
N-hydroxy-succinimide ester      29
Nanomechanical cantilever sensor      195ff
Neurotoxins screening      21
Ni-NTA complex      13 33
Nitrocellulose      22f 25 27
Non-contact printing      169
Non-specific adsorption      15
Non-specific interaction      23
NTA capture agents      124ff
Nylon      23 27 29
Nylon membrane      25
Oligo ethylene glycol      18
Oligonucleotides      207
Open perimeter      227
Orientation      16
Oriented surfaces      175
Outliers      221
p-value      225
p53      167 175
Particle lithography      21
PDMS      110 113 119ff 126
PDMS, peptides      119ff
peg      119 121
PEG, anti-Myc      119
Percentage, ignored pixels      226
Percentage, open perimeter      227
pH detection      203
pH detection, cantilever      203
Phenyldiboronic acid      31
Photoaptamer      31
Photochemical cross-coupling      29
Photografting      24
Photoimmobilization      21
Photopatterning      107ff 113ff 126
Photopatterning, protein      120ff
Photoreaction      16
Photoreaction, aldehyde coated      16
Photoreaction, glass slide      16
Photoreactive group      29
Piezo      169
Plasmons      60
PMMA      29
Polyacrylamide      22 23
Polyethylene      29
Polyethylene glycol (PEG)      113
Polylysine      12 15 28
Polymer brush      22f
Polymer gel      24
Polymer membrane      22f
Polymethyl methacrylate      27
Polypropylene      29
polystyrene      22 29
Polyvinylpyrrolidone      180
Position offset      226
Post-translational modification      99 165 183 188
ppH      203
Preparation      24
Printing buffer      179 186
Prostate specific antigen      209
Protein A      34
Protein A-IgG      208
Protein arrays      99 169
Protein arrays, data complexity      99
Protein arrays, size of      99
Protein arrays, technical challenges for      99
Protein labeling      182
Protein labeling, chemical      182
Protein labeling, fluorescent fusion proteins      182
Protein labeling, radiolabeling      182
Protein microarray      39 168
Protein microarray systems      98ff
Protein microarray, application      39
Protein microarray, platform optimization      39
Protein microarray, types of      168
Proteomics      58ff 98ff 154ff 159ff
Proteomics, affinity precipitation      155
Proteomics, Amyloid b      159
Proteomics, biochips      159ff
Proteomics, challenges for in relation to genomics      98
Proteomics, elektrospray      154
Proteomics, ELISA      155
Proteomics, interaction discovery mapping      159
Proteomics, MALDI      154
Proteomics, mass spectrometry      154 156 159
Proteomics, protein biochips      156
Proteomics, protein interactions      159
Proteomics, protein microarrays      156
Proteomics, SELDI      154 156
Proteomics, troponins      160
Proteomics, Western Blot      155
Pyridyl disulfide      29
Quality control      223
Quality flagging      235
Quality measurements      223
Quality measures      223
Quality values      223
Quantification method      230
Quartz      14
Radioimaging      22
Ratio estimation      233
Redox-active label      27
Reflectance of light      24
Reflective slide      25
Reflectivity signal      136
Refractive index      24
Regeneration      66 68 72ff 145f
Regeneration, number of cycles possible      72
Regeneration, optimal solution      72
Region-growing      222
Replicate measurements      229
Replicate standard deviation      229
Reproducibility      25
Resonance      61
Resonance, refractive index contribution      61
Response regulators      116ff 128
RNA      107 121ff 125 127
RNA, DNA      125ff
Rolling circle amplification      184
Salicylhydroxamic acid (SHA)      32 40ff
Sample dilution      180
Sample volume      179
Sandwich assay      25 183
Sandwich detection      139ff 142
SATP      111ff 119
Scanning tunneling microscopy      21
Segmentation      219 220ff
Segmentation, circular      219
Segmentation, hybrid      222
Segmentation, Mann-Whitney      220
Segmentation, method      229
Segmentation, spatial      219
Segmentation, trimmed measurements      221
SELDI      153
Self-assembled monolayer      13 17f 23f 177
Semiconductor chip      14 25ff
Semiconductor surface      27
Serial dilution      179
Shape regularity      227
Signal contamination      225
Signal estimation      229
Signal intensity      25 223
Signal volatility      225
Signal, to-noise ratio      20 31
Silanization      13
Silicon      14
Silicon oxide      14
Silicon wafer      119
Site-specific immobilization      34ff
Slide, 2-D SHA coated      41 42 48
Slide, 2-D SHA coated, intrisic fluorescence      48ff
Slide, 2-D SHA coated, non-specific protein binding      48ff
Slide, 2-D SHA coated, preparation      42
Slide, 3-D SHA coated      41 48 51
Slide, 3-D SHA coated, intrisic fluorescence      48ff
Slide, 3-D SHA coated, non-specific protein binding      48ff
Slide, 3-D SHA coated, PDBA-Protein conjugate      51ff
slides      167 169 172ff 174ff 180ff 186
Slides, acrylamide      173 175 180
Slides, agarose      177
Slides, aldehyde      167 172ff 180
Slides, amine      172ff
Slides, BSA-NHS      174
Slides, derivatized glass      167 169 172 186
Slides, epoxy      172ff
Slides, FAST      173 177 180
Slides, GAPS      173
Slides, HydroGel      176
Slides, HydroGel-coated      173
Slides, nickel      167 173 175 181
Slides, nitrocellulose      173 177 180 186
Slides, poly L-lysine      167
Slides, storage      51
Slides, streptavidin      173 180
Software      171
Solid pins      170 174 180
Solute array      168
Spacer molecule      20
SPFS      135 145
SPFS, concentration      145
SPFS, Instrumentation      135
Split pins      170f 179
Spot      171 177 179ff 185 218f
Spot contamination      219
Spot density      171
Spot finding      217
Spot intensity      177 179 185
Spot location      218
Spot morphology      179ff
Spot shape      218
Spot size      177 218
Spot tracking      171
Spot, amount of sample      179
Spot, surface-to-volume ratios      179
SPR      23 57ff 115ff 120ff
SPR imaging      113ff
SPR-MS      59 97ff
SPR-MS, combination of technologies      97
SPR-MS, MALDI target      98
SPR-MS, methods of combining SPR and MS      98
SSMCC      111ff 119
Stability      186
Standard operating procedures      177ff
Storage      25
Strep-Tactin      33
Strep-Tag      32f
Streptavidin      13 19f 32f 175
Streptavidin surface      19ff
Styrene      24
Supramolecular      27
Surface chemistry      171
Surface concentration      137
Surface concentration, SPR signal conversion      138
Surface matrix      132
Surface modification      23
Surface patterning      21
Surface plasmon field-enhanced fluorescence spectroscopy (SPFS)      131—133 135 137 144
Surface plasmon field-enhanced fluorescence spectroscopy (SPFS), fluorescence profile at the interface      133
Surface plasmon field-enhanced fluorescence spectroscopy (SPFS), instrumentation      135
Surface plasmon field-enhanced fluorescence spectroscopy (SPFS), LOD evaluation      144
Surface plasmon field-enhanced fluorescence spectroscopy (SPFS), SPR signal conversion      137ff
Surface plasmon resonance (SPR)      18 57ff 60 69 70 72ff
Surface plasmon resonance (SPR), absolute response      69
Surface plasmon resonance (SPR), bulk effects      74
Surface plasmon resonance (SPR), bulk response      69
Surface plasmon resonance (SPR), detection limit      70
Surface plasmon resonance (SPR), detection princips      60ff
Surface plasmon resonance (SPR), drug compounds      74
Surface plasmon resonance (SPR), excluded volume effect      74
Surface plasmon resonance (SPR), experimental design      73
Surface plasmon resonance (SPR), imaging      107ff 108ff
Surface plasmon resonance (SPR), immobilization levels      72
Surface plasmon resonance (SPR), non-specific binding      73
Surface plasmon resonance (SPR), relationship of SPR      69 72
Surface plasmon resonance (SPR), relative response      69
Surface plasmon resonance (SPR), response to binding      69
Surface plasmon resonance (SPR), response to molecular weight      72
Surface plasmon resonance (SPR), Rmax      72
Surface plasmon resonance (SPR), solvent correction      74
Surface plasmon resonance (SPR), specific refractive index increment      70
Surface plasmon resonance (SPR), specificity      73
Surface plasmon resonance (SPR), SPR angle      60ff
Surface property      18
Surface stress      202ff 207
Surface stress origin      202ff
Surface stress, DNA oligonucleotides      207
Surface stress, hybridization      207
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