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Graham J., Baldock R. — Image processing and analysis. A practical approach
Graham J., Baldock R. — Image processing and analysis. A practical approach

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Название: Image processing and analysis. A practical approach

Авторы: Graham J., Baldock R.

Аннотация:

This volume presents the subject of image processing and analysis to the point of view of the user. The standard algorithms, procedures, and rules of thumb are explained in the context of successful application to biological or medical images and chapters cover image acquisition, processing, analysis, and pattern recognition. This approach equips the user with the necessary background for informed use of image processing software, and the ability to write their own programs. There are explanations of more advanced techniques, and each has reference to specific applications. This is an extremely usable, practical guide for the beginning postgraduate biologist or medical researcher.


Язык: en

Рубрика: Computer science/Обработка изображений/

Статус предметного указателя: Готов указатель с номерами страниц

ed2k: ed2k stats

Год издания: 2000

Количество страниц: 301

Добавлена в каталог: 17.11.2005

Операции: Положить на полку | Скопировать ссылку для форума | Скопировать ID
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Предметный указатель
3D      see "Three-dimensional"
4-connected      see "Connectivity"
8-connected      see "Connectivity"
Active contour      85—87
Active contour, energy function      86
Active contour, greedy algorithm      85
Active contour, models      225
Affine      see "Transformations"
Airy disc      3
ALICE      106
Alignment      242—244 see "Registration"
Alignment of sections      166
Alignment, Procrustes      242
Alignment, tangent space      243
Analytical Imaging Station      105
AND      see "Binary image processing"
Aphelion      106
Aspect ratio      125
Astigmatism      12
Atlas      198 212 261 see
Augmented coordinates      274 see
Autofluorescence      15
Autofocus      31 104
Automation      see "Computer controlled microscope"
Automation, automatic karotyping      69
Automation, quantitative microscopy      1
Banding      see "Chromosome"
Barrel distortion      12
Basis functions      263
Basis functions, radial, interpolation      284
Basis functions, radial, network      134—135
Basis functions, sinusoidal (Fourier)      100
Bayes' risk      115
Bayes' rule      97 114
Bayesian classification      96—98
Binary image      87
Binary image processing      87 see
Binary image processing, cross-correlation      178
Binary image processing, hit-or-miss transform      87
Binary image processing, logical AND      89 266
Binary image processing, logical OR      89 266
Binary image processing, overlap      179
Binary image, overlay      264—267
Binomial distribution      98
Blink comparator      264 268—269
Bootstrap method      141 142 see
Boundary refinement      72 85—94
Bounding box      263
Buffon's needle      253
Camera      1 19—28 see
Camera, calibration      23
Camera, choosing      27
Canny edge detector      see "Edge"
CCD      see "Charge coupled device"
Centre of gravity      203
Centromere      70 94 113
Centromeric index      94 125
CGH      see "Comparative genomic hybridisation"
Chamfer distance      205
Charge coupled device (CCD)      19—24 see
Charge coupled device (CCD), binning      23 32
Charge coupled device (CCD), cooling      26 30
Charge coupled device (CCD), fill factor      21
Charge coupled device (CCD), gain      22
Charge coupled device (CCD), gamma      22
Charge coupled device (CCD), linearity      22
Charge coupled device (CCD), quantum efficiency      22
Charge coupled device (CCD), sensitivity      21
Charge coupled device (CCD), spectral sensitivity      21
chromatic aberration      11
Chromosome domains, location      257
Chromosome domains, size of      259
Chromosome, analysis      69
Chromosome, banding      94
Chromosome, classification      see "Classification"
Chromosome, features, banding pattern      94—96
Chromosome, features, morphological      94
Chromosome, measurement      93
Chromosome, painting      102
Chromosome, Q-banding      94
Chromosome, straightening      99
Chromosome, X and Y      113
Circularity      125
City-block      see "Distance"
Classification      111
Classification of chromosomes      96 112—113 137—140
Classification, colour      103
Classification, features      94—96
Classification, misclassification cost      115 117
Classification, probabilistic framework for      114
Classification, space      117
Classifier, Bayesian      96—98
Classifier, box      115
Classifier, k-Nearest neighbour      123 124
Classifier, linear      117—121
Classifier, maximum likelihood      114
Classifier, nearest neighbour      122
Classifier, non-parametric      121
Classifier, parametric      121
Classifier, quadratic      117—121
Classifier, set size      143
Classifier, training      98 112
Classifier, validation      141
Closing      see "Mathematical morphology"
Clustering      129—131
Colour comparator      267—268
Coma      12
Compactness      125
Comparative genomic hybridisation (CGH)      70 102
Computed tomography (CT)      38 39 154 261
Computer assisted reconstruction (CAR)      153
Computer controlled microscope stage      1 30
Confocal microscope (CLSM)      13 155
Confusion matrix      142
Congruencing      168 180
Conjugate planes      8
Connectivity      72 227
Connectivity, 4-connected      72
Connectivity, 8-connected      72
contour      159
Contour, acquisition      164
Contour, annotation      165
Contour, software      165
Contrast manipulation      37 39—46
Convex hull      92
Convolution      77
Convolution, Gaussian      78
Convolution, kernel      77
Convolution, smoothing      78
Coordinate transformation      261
Correlation      224 see
Correspondence, tie-points      273
Cost-function      232 233
Covariance matrix      228 235
Cross validation      141
Cross-correlation      179 185 276
Cross-correlation, normalised      208
CT      see "Computed tomography"
Curvature of field      12
Curvature, 3D      203
Curvature, analysis      91 93
Curve fitting      see also "Hough transform"
Curve fitting for edge linking      82
Curve fitting, conformal polyline      280
Curve fitting, iterative endpoint fitting algorithm      82
Curve fitting, piecewise linear      83
Cytogenetics      69 see
Cytophotometry      2
Data fusion      see "Image fusion"
Decision space      117
Decision surface      115 117
Decision surface, linear      119
Decision surface, piecewise linear      122
Decision surface, quadratic      119
Deformable models      225
Density profile      113
Depth of field      10
Design equation      263 282—285
Design equation for multiquadric      284
Design equation for thin-plate spline      283
Developmental biology      154
Diaphragm      8 17
Diascopic      190 191
Digitizing tablet      161
Digitizing tablet, LCD tablet      164
Dilation      see "Mathematical morphology"
Discriminant function      119
Distance, city-block      123
Distance, Euclidean      123
Distance, Mahalanobis      98 118 123
Distortion      see "Optical distortion"
Dithering      264—266
DNA loci      256
EDGE      77—84 233
Edge, Canny edge detector      51 81
Edge, detection      49 51 77—81
Edge, Kirsch operator      80
Edge, Laplacian      77
Edge, Laplacian of Gaussian      78
Edge, linking      78 81—84
Edge, multiresolution edge detection      81
Edge, Prewitt operator      80
Edge, Roberts operator      80
Edge, scale      51
Edge, Sobel operator      49 51 80
Edinburgh Mouse Atlas      286—287
Eigen      see also "Principal components"
Eigen, analysis      128
Eigen, vector      128 228
Elastic plate warping      286
Energy function for active contour      86
Episcopic image      190 191
Erosion      see "Mathematical morphology"
Euclidean      see "Distance"
Expectation-maximisation (EM) algorithm      121
Face image      224
Factor analysis      128
False positive, negative      144—145
Feature      1
Feature, clustering      129—131
Feature, combining      128—129
Feature, correlation of      125 128
Feature, non-commensurate      123
Feature, selection      113 124—128
Feature, space      117
Feature, vector      114
Fiducial      168—173 see
Fiducial, landmark frames      171
Fiducial, markers      199
Fiducial, point      168—169
Fiducial, region      168—171
Filter, image filtering      37 46—53 see
Filter, image filtering, edge detection      49
Filter, image filtering, fourier representation      49—50
Filter, image filtering, Gaussian      47
Filter, image filtering, gradient      76
Filter, image filtering, high-pass      100
Filter, image filtering, linear      46—50
Filter, image filtering, median      50
Filter, image filtering, morphological      46
Filter, image filtering, non-linear      47 50—53
Filter, image filtering, sharpening      48
Filter, image filtering, smoothing      47
Filter, image filtering, spatially adaptive      50
Filter, image filtering, unsharpmask      49
Filter, optical      17—18
Finite element method      285
FISH      70 102
FISH, M-FISH      70 103
Fit-function      see "Cost-function"
Flare      6
Floyd-Steinberg      see "Dithering"
Fluorescence      2 6 see
Fluorescence in situ hybridisation      70 102
Fluorescence in situ hybridisation, multicolour      70
Fluorescence in situ hybridisation, multiplex      103
Fluorescence, microscopy      2 13
Fourier coefficients      94
Fourier descriptors      224
Fourier fast transform      186
Fourier transform      100
Fourier transform for filtering      49—50
Frame grabber      24 162
Frequency domain      49
FROC      see "Receiver operating characteristic"
Functional transformation      40
Fungal mycelia      37—38
Fusion      see "Image fusion"
Gaussian function as chromosome classification feature      95
Gaussian function as normal distribution      98
Gaussian function as smoothing filter      47
Gaussian function in Canny edge detector      51
Gaussian function, convolution      78
Gaussian function, Laplacian of      78
Gaussian function, separable      47
Gene-expression      154 286
Genetic algorithm (GA)      127 232
Geometric distortion      12
Geometric transformation      173
Geometric transformation, linear      173
Geometric transformation, rigid      173
Geometric transformation, spatial      174
Gibbs distributions      64
GIS      261 278
Gold Standard      215
Gradient      see "Image gradient"
Graham's scan (convex hull algorithm)      92
Greylevel      75 see
Greylevel, histogram      75
Ground truth      141 215
Histogram, bimodal      43
Histogram, equalisation      41
Histogram, histogram-based transform      41
Histological images      212
Homogenous coordinates      174 275
Hough transform      83—84
Hull      see "Convex hull"
ICP      see "Iterative closest point"
Illumination      see also "Lamps" "Shade
Illumination, diascopic      190
Illumination, episcopic      190
Image acquisition      1 161 see
Image acquisition, software      162
Image analysis      69—109 111
Image comparison      264
Image domain      263
Image enhancement      37—67 99
Image enhancement, wavelet      100
Image fusion      197
Image gradient      76 see
Image gradient, thresholding      76
Image invariants      180—181
Image invariants, orientation      181
Image invariants, proportion      181
Image invariants, translation      180
Image matching      167
Image moments      180
Image processing      37—67
Image processing, bottom-up      223
Image processing, top-down      223
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