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Haile J.M. — Molecular Dyanmics Simualtion: Elementary Methods
Haile J.M. — Molecular Dyanmics Simualtion: Elementary Methods



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Íàçâàíèå: Molecular Dyanmics Simualtion: Elementary Methods

Àâòîð: Haile J.M.

Àííîòàöèÿ:

Written especially for the novice, Molecular Dynamics Simulation demonstrates how molecular dynamics simulations work and how to perform them, focusing on how to devise a model for specific molecules and then how to simulate their movements using a computer. This book provides a collection of methods that until now have been scattered through the literature of the last 25 years. It reviews elements of sampling theory and discusses how modern notions of chaos and nonlinear dynamics explain the workings of molecular dynamics.


ßçûê: en

Ðóáðèêà: Ôèçèêà/

Ñòàòóñ ïðåäìåòíîãî óêàçàòåëÿ: Ãîòîâ óêàçàòåëü ñ íîìåðàìè ñòðàíèö

ed2k: ed2k stats

Ãîä èçäàíèÿ: 1997

Êîëè÷åñòâî ñòðàíèö: 512

Äîáàâëåíà â êàòàëîã: 26.09.2009

Îïåðàöèè: Ïîëîæèòü íà ïîëêó | Ñêîïèðîâàòü ññûëêó äëÿ ôîðóìà | Ñêîïèðîâàòü ID
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Ïðåäìåòíûé óêàçàòåëü
Time correlation functions, code for computing      399—410
Time correlation functions, code for computing      399—410
Time correlation functions, collective      291—296
Time correlation functions, collective      291—296
Time correlation functions, cross      278 320
Time correlation functions, cross      278 320
Time correlation functions, definition of      278
Time correlation functions, definition of      278
Time correlation functions, derivatives of      280—281
Time correlation functions, derivatives of      280—281
Time correlation functions, short-time behavior of      281—282
Time correlation functions, short-time behavior of      281—282
Time correlation functions, single-particle      282—291
Time correlation functions, single-particle      282—291
Time correlation functions, static      281—282
Time correlation functions, static      281—282
Time correlation functions, stationary property of      278 281—282 319
Time correlation functions, stationary property of      278 281—282 319
Time correlation functions, stress      293—296 305—306
Time correlation functions, velocity      233 282—291
Time reversal invariance      145 182—183
Time, units of      113 199 219
Time-step      202
Time-step      202
Time-step as indicator of order of finite-difference method      151 181 184
Time-step as indicator of order of finite-difference method      151 181 184
Time-step effect on errors      152—153 164 175
Time-step effect on errors      152—153 164 175
Time-step effect on stability      154—157 180—181 183 220
Time-step effect on stability      154—157 180—181 183 220
Time-step, units of      163 219
Time-step, units of      163 219
Time-step, value of, for Gear algorithms      163 183 202 220
Time-step, value of, for Gear algorithms      163 183 202 220
Torus      47 49—50 98
Torus      47 49—50 98
Trains at station      310
Trains at station      310
Trains passing      292
Trains passing      292
Transport properties      296—310
Transport properties      296—310
Truncated potential      190—192
Truncated potential      190—192
Truncated potential, corrections for      227 229—230 234 248—249 269 271—272
Truncated potential, corrections for      227 229—230 234 248—249 269 271—272
Truncation error      see "Errors in
Truncation error      see "Errors in
Turkey shoot      180
Turkey shoot      180
Two-dimensional harmonic oscillator      see "Harmonic oscillator"
Two-dimensional harmonic oscillator      see "Harmonic oscillator"
Two-way plots      354—359
Two-way plots      354—359
Uncertainties      see "Errors"
Uncertainties      see "Errors"
Unit cell, for fcc lattice      115—116 418 446
Unit cell, for fcc lattice      115—116 418 446
Units for hard spheres      112—113
Units for hard spheres      112—113
Units for soft spheres      198—199
Units for soft spheres      198—199
Units, conversion factors for      462
Units, conversion factors for      462
Unpredictable dynamics      see "Dynamics predictable"
Unstable trajectories      see "Stability of
Unstable trajectories      see "Stability of
Validity of a simulation      20—23
Validity of a simulation      20—23
Van Hove correlation functions      310—311
Van Hove correlation functions      310—311
Variance      72—77 101
Vaudeville      8
Velocity autocorrelation function      282—291
Velocity autocorrelation function      282—291
Velocity autocorrelation function of ODHO      282—283 320
Velocity autocorrelation function of ODHO      282—283 320
Velocity autocorrelation function, calculation of      284—287
Velocity autocorrelation function, long-time tail of      289—291 303
Velocity autocorrelation function, relation to mean square force      233 323
Velocity autocorrelation function, relation to mean square force      233 323
Velocity autocorrelation function, relation to temperature      283
Velocity autocorrelation function, relation to temperature      283
Velocity autocorrelation function, short-time behavior of      281—282 323
Velocity autocorrelation function, short-time behavior of      281—282 323
Velocity autocorrelation function, uncertainties in      287—289
Velocity autocorrelation function, uncertainties in      287—289
Velocity distribution      64—66 106 113 117 120—123 131 167—172 206—207 211 394—397 434 456
Velocity distribution      64—66 106 113 117 120—123 131 167—172 206—207 211 394—397 434 456
Velocity of sound      86—87 98 243 289 463
Velocity of sound      86—87 98 243 289 463
Velocity, initial assignment of, for hard spheres      113 117 419
Velocity, initial assignment of, for hard spheres      113 117 419
Velocity, initial assignment of, for soft spheres      202
Velocity, initial assignment of, for soft spheres      202
Velocity, initial assignment of, to adjust for zero momentum      113 117 203 220 384—385 419 447
Velocity, initial assignment of, to scale for energy      200 220 459
Velocity, initial assignment of, to scale for energy      200 220 459
Velocity, initial assignment of, to scale for temperature      200 384—385 396—397 459
Velocity, initial assignment of, to scale for temperature      200 384—385 396—397 459
Velocity, peculiar      62
Velocity, peculiar      62
Velocity, postcollision      105—107 114 423
Velocity, postcollision      105—107 114 423
Velocity, precollision      105—107
Velocity, precollision      105—107
Velocity, reversal      178 183 184
Velocity, reversal      178 183 184
Verlet algorithm      158—159 181—184
Verlet algorithm      158—159 181—184
Verlet algorithm compared with Gear      164—165 172—177 182—183
Verlet algorithm compared with Gear      164—165 172—177 182—183
Virial      127 132 292 338 429 451
Virial      127 132 292 338 429 451
Virial coefficient, second      144 218—219
Virial coefficient, second      144 218—219
Virial theorem      126—127 292 332—333
Virial theorem      126—127 292 332—333
Viscosity, bulk      294 298 306 309
Viscosity, bulk      294 298 306 309
Viscosity, longitudinal      298
Viscosity, longitudinal      298
Viscosity, shear      290 294 298 305—310 323—325 463
Viscosity, shear      290 294 298 305—310 323—325 463
Volume, phase-space      63 67 102—103 243—244 340 350 352
Volume, phase-space      63 67 102—103 243—244 340 350 352
Volume, units of, in English system      464
Volume, units of, in English system      464
Water      29 31 217 357 463
Water      29 31 217 357 463
Wobegon, Lake      293—294
Wobegon, Lake      293—294
Work      40 94 246—247
Work      40 94 246—247
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